BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C11LP1|AL429198
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1492 1665 0.0
>3x_Contig1492
Length = 8701
Score = 1665 bits (838), Expect = 0.0
Identities = 878/889 (98%), Gaps = 3/889 (0%)
Strand = Plus / Plus
Query: 4 agacagantctggtaattcgtggggtctgaaactggtcttgtacaaaacgttaccc-aaa 62
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5159 agacagattctggtaattcgtggggtctgaaactggtcttgtacaaaacgttaccccaaa 5218
Query: 63 gcgttaacgaag-atggaagatcttccttcaagaaagtagccttcaaagtgatgtattct 121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 gcgttaacgaagtatggaagatcttccttcaagaaagtagccttcaaagtgatgtattct 5278
Query: 122 ctgtcaacactggattcgaacttaccacccaacaattcactttctctaaccaatctcaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 ctgtcaacactggattcgaacttaccacccaacaattcactttctctaaccaatctcaaa 5338
Query: 182 gcagacttgttaccggtgttatggaagttgaatctggacaaaaggtgggcaataccttct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 gcagacttgttaccggtgttatggaagttgaatctggacaaaaggtgggcaataccttct 5398
Query: 242 ttgtcggcgtaacgagaaccaccgtgaaccttaacagccaaagtggatagtttaccggaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 ttgtcggcgtaacgagaaccaccgtgaaccttaacagccaaagtggatagtttaccggaa 5458
Query: 302 ccgtctttagcggaaatactgaattttctagcagtttgctgggcaaattgtaatctactg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 ccgtctttagcggaaatactgaattttctagcagtttgctgggcaaattgtaatctactg 5518
Query: 362 gacaacatctttatattatatgtttatgggctttttaattttgggagttagaatatcaat 421
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5519 gacaacatctttatattatatgtttatgggctttttaattttgggagtcagaatatcaat 5578
Query: 422 caatatcaatatcaattatgcgttaatcaaaaggtcttcctctacttttcctttaatgtc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5579 caatatcaatatcaattatgcgttaatcaaaaggtcttcctctacttttcctttaatgtc 5638
Query: 482 caaactcaaataatatttactcacacacaaaataagtatcgaaacagagcaaaaaaagta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5639 caaactcaaataatatttactcacacacaaaataagtatcgaaacagagcaaaaaaagta 5698
Query: 542 cactgacagagttacgagtaaaacaaagtaatcaaaatagtatatcaatcacaaatcttt 601
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5699 cactgacagagtaacgagtaaaacaaagtaatcaaaatagtatatcaatcacaaatcttt 5758
Query: 602 acaaaacctgtaatcaaaaccaatcttcaaacaaaaagctctaaactttgaagtagaatt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5759 acaaaacctgtaatcaaaaccaatcttcaaacaaaaagctctaaactttgaagtagaatt 5818
Query: 662 gtcatattttgttataaatttttcaagaacctattgaataaagctatatgcgataaaatc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5819 gtcatattttgttataaatttttcaagaacctattgaataaagctatatgcgataaaatc 5878
Query: 722 caataactaacaaaaaaaaaaaaaattgaaaaaaaaaagatatttcgagatgtgaagact 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5879 caataactaacaaaaaaaaaaaaaattgaaaaaaaaaagatatttcgagatgtgaagact 5938
Query: 782 gatctctacagaggratcagagaagaagcgagcmgattctgtagaaaggagaagcgtgct 841
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5939 gatctctacagaggaatcagagaagaagcgagctgattctgtagaaaggagaagcgtgct 5998
Query: 842 tagaccatcttgggagtaacagtaagaagggggtatcgggktttagcgg 890
||||||||||| ||||| |||||||||||||| ||||||| ||||||||
Sbjct: 5999 tagaccatctt-ggagtcacagtaagaaggggatatcgggttttagcgg 6046
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,672
Number of Sequences: 1807
Number of extensions: 17672
Number of successful extensions: 1260
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)